Stem-loop rmi-mir-5320

Accession

MI0018502

Description

Rhipicephalus microplus rmi-mir-5320 precursor miRNA

Sequence

guuuuuuagucgcugccauauauagcgacacaaagaauuuaauugagguauaugauaagacggcaauuccaugacuaaaggugcggguuuuccUGGAAGGAUCGUUUUUCGuaaaacuaaaccggaaaggauagca
(((((((.(((((((.......)))))))..)))))))........(((.(((((.(((((((...(((((.((..(((........))))).)))))...))))))))))))..)))...((.....))......

Structure

guuuuuuagucgcugccauauauagcgacacaaagaauuuaauuga   -a     u       caa     u  cu   ggu 
                                              ggu  uauga aagacgg   uucca ga  aaa   g
                                              |||  ||||| |||||||   ||||| ||  |||    
                                              uca  auGCU UUUUGCU   AAGGU cu  uuu   c
----------------------------acgauaggaaaggccaaa   aa     -       AGG     c  --   ggg 

Annotation confidence Not enough data

Genome context

Unknown

Mature rmi-miR-5320

• Accession: MIMAT0021393
• Description: Rhipicephalus microplus rmi-miR-5320 mature miRNA
• Sequence: 94 - UGGAAGGAUCGUUUUUCG - 111
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21699734
   Evolutionary conserved microRNAs are ubiquitously expressed compared to tick-specific miRNAs in the cattle tick Rhipicephalus (Boophilus) microplus
   Barrero RA, Keeble-Gagnère G, Zhang B, Moolhuijzen P, Ikeo K, Tateno Y, Gojobori T, Guerrero FD, Lew-Tabor A, Bellgard M
   BMC Genomics (2011) 12:328