Stem-loop rmi-mir-5324

Accession

MI0018506

Description

Rhipicephalus microplus rmi-mir-5324 precursor miRNA

Sequence

gcgcgcgcaugcgcugucgcgcUUCGAGAACAUCGGCAGCUGACGCgcgcgcaugcgccguugcgcuucccccccuucucgaacauucagacagcugacgcgcgcaugca
(((((((((...((((((....((((((((....((.((((((((.((((....))))))))).))).)).....))))))))......)))))))).))))))).....

Structure

-----       -  ugc      --gcgc        -CAUC  C   -     C    g 
     gcgcgcg ca   gcuguc      UUCGAGAA     GG AGC UGACG gcgc c
     ||||||| ||   ||||||      ||||||||     || ||| ||||| ||||  
     cgcgcgc gu   cgacag      aagcucuu     cc ucg guugc cgcg a
acgua       a  ---      acuuac        ccccc  u   c     -    u 

Annotation confidence Not enough data

Genome context

Unknown

Mature rmi-miR-5324

• Accession: MIMAT0021397
• Description: Rhipicephalus microplus rmi-miR-5324 mature miRNA
• Sequence: 23 - UUCGAGAACAUCGGCAGCUGACGC - 46
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21699734
   Evolutionary conserved microRNAs are ubiquitously expressed compared to tick-specific miRNAs in the cattle tick Rhipicephalus (Boophilus) microplus
   Barrero RA, Keeble-Gagnère G, Zhang B, Moolhuijzen P, Ikeo K, Tateno Y, Gojobori T, Guerrero FD, Lew-Tabor A, Bellgard M
   BMC Genomics (2011) 12:328