Stem-loop rmi-mir-5317a

Accession

MI0018498

Description

Rhipicephalus microplus rmi-mir-5317a precursor miRNA

Literature search

1 open access papers mention rmi-mir-5317a
(1 sentences)

Sequence

ugguaugacaugacgauaguuaaagcgcgagaacauaacgacgacacagagacaagaagugucUUUCUUGUCUCUGUGUCGUCGUUUuguucucgcgcuauaacuaucgu
............((((((((((.((((((((((((.(((((((((((((((((((((((....))))))))))))))))))))))).)))))))))))).))))))))))

Structure

ugguaugacaug          a            u                       u 
            acgauaguua agcgcgagaaca aacgacgacacagagacaagaag g
            |||||||||| |||||||||||| |||||||||||||||||||||||  
            ugcuaucaau ucgcgcucuugu UUGCUGCUGUGUCUCUGUUCUUU u
------------          a            U                       c 

Annotation confidence Not enough data

Genome context

Unknown

Mature rmi-miR-5317a

• Accession: MIMAT0021389
• Description: Rhipicephalus microplus rmi-miR-5317a mature miRNA
• Sequence: 64 - UUUCUUGUCUCUGUGUCGUCGUUU - 87
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21699734
   Evolutionary conserved microRNAs are ubiquitously expressed compared to tick-specific miRNAs in the cattle tick Rhipicephalus (Boophilus) microplus
   Barrero RA, Keeble-Gagnère G, Zhang B, Moolhuijzen P, Ikeo K, Tateno Y, Gojobori T, Guerrero FD, Lew-Tabor A, Bellgard M
   BMC Genomics (2011) 12:328