Stem-loop bta-mir-133c

Accession

MI0025193

Description

Bos taurus bta-mir-133c precursor miRNA

Literature search

12 open access papers mention bta-mir-133c
(42 sentences)

Sequence

reads, None reads per million, experiments

gccaucaaugcgcagcuacagcugguugaaggggaccaaauccaucgaacaguugAUUUGGUUCCAUUUUACCAGCuuuagcaaagcauucggu
(((...(((((...((((.(((((((.(((.(((((((((((.((......)).))))))))))).))).))))))).))))...))))).)))

Structure

   auc     gca    c       u   g           c  cg 
gcc   aaugc   gcua agcuggu gaa gggaccaaauc au  a
|||   |||||   |||| ||||||| ||| ||||||||||| ||   
ugg   uuacg   cgau uCGACCA UUU CCUUGGUUUAg ug  a
   --c     aaa    u       U   A           u  ac 

Annotation confidence Not enough data

Genome context

chr13: 55446233-55446326 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from bta-mir-133c

Mature bta-miR-133c

• Accession: MIMAT0029949
• Description: Bos taurus bta-miR-133c mature miRNA
• Sequence: 56 - AUUUGGUUCCAUUUUACCAGC - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23100578
   Profiling of differentially expressed microRNA and the bioinformatic target gene analyses in bovine fast- and slow-type muscles by massively parallel sequencing
   "Muroya S, Taniguchi M, Shibata M, Oe M, Ojima K, Nakajima I, Chikuni K"
   "J Anim Sci (2013) 91:90-103