Stem-loop rmi-mir-5316a

Accession

MI0018496

Description

Rhipicephalus microplus rmi-mir-5316a precursor miRNA

Sequence

gauuuuguaccacuagcaggcuggcgaaaauguuccgguugaauugaauggcugauuugUCACCGGCGCUUUUUCGACGAGcuuuccgugguuucucgucaca
(((.....(((((....(((((.(((((((.((.(((((.((...((((.....)))).))))))).)).)))))).).)))))...))))).....)))...

Structure

---   uuugu     uagc     g -      u  u     u  auu    g 
   gau     accac    aggcu g cgaaaa gu ccggu ga   gaau g
   |||     |||||    ||||| | |||||| || ||||| ||   |||| c
   cug     uggug    uucGA C GCUUUU CG GGCCA CU   uuua u
aca   cucuu     -ccu     G A      U  C     -  --g    g 

Annotation confidence Not enough data

Genome context

Unknown

Mature rmi-miR-5316a

• Accession: MIMAT0021387
• Description: Rhipicephalus microplus rmi-miR-5316a mature miRNA
• Sequence: 60 - UCACCGGCGCUUUUUCGACGAG - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21699734
   Evolutionary conserved microRNAs are ubiquitously expressed compared to tick-specific miRNAs in the cattle tick Rhipicephalus (Boophilus) microplus
   Barrero RA, Keeble-Gagnère G, Zhang B, Moolhuijzen P, Ikeo K, Tateno Y, Gojobori T, Guerrero FD, Lew-Tabor A, Bellgard M
   BMC Genomics (2011) 12:328