Stem-loop isc-mir-3931

Accession

MI0018489

Description

Ixodes scapularis isc-mir-3931 precursor miRNA

Literature search

1 open access papers mention isc-mir-3931
(2 sentences)

Sequence

ucgaagacugcacacuggauacgauuuguaccgacucuuggcuagguuuucgagaaacUACUUUGAGUCGGUACGAAUCCUuuccucucugcauaaacuccacgg
........((((....(((...(((((((((((((((..((...((((((...)))))).))..)))))))))))))))...)))....))))............

Structure

----ucgaagac    cacu   uac               uu  cua      c 
            ugca    gga   gauuuguaccgacuc  gg   gguuuu  
            ||||    |||   |||||||||||||||  ||   |||||| g
            acgu    ccu   CUAAGCAUGGCUGAG  UC   Ucaaag  
ggcaccucaaau    cucu   uUC               UU  --A      a 

Annotation confidence Not enough data

Genome context

DS763086: 296440-296544 [-]

Mature isc-miR-3931

• Accession: MIMAT0021380
• Description: Ixodes scapularis isc-miR-3931 mature miRNA
• Sequence: 59 - UACUUUGAGUCGGUACGAAUCCU - 81
• Evidence: not_experimental

References

1. PubMed ID: 21699734
   Evolutionary conserved microRNAs are ubiquitously expressed compared to tick-specific miRNAs in the cattle tick Rhipicephalus (Boophilus) microplus
   Barrero RA, Keeble-Gagnère G, Zhang B, Moolhuijzen P, Ikeo K, Tateno Y, Gojobori T, Guerrero FD, Lew-Tabor A, Bellgard M
   BMC Genomics (2011) 12:328