Stem-loop rmi-mir-5329

Accession

MI0018511

Description

Rhipicephalus microplus rmi-mir-5329 precursor miRNA

Literature search

1 open access papers mention rmi-mir-5329
(1 sentences)

Sequence

ggucgacagaggagagcgagaaagcgcgggaagagccagagacgcagcgagaacggcgacgaacgaagagucugcgaauugcgAGCGACUUGAGCGGUUGUGCGUUGUgc
(.((..(...)..)).).....((((((.((...((..(((.(((.((((...((..(((.........)))..))..))))..))).)))..))..)).))))))....

Structure

ggucgacagaggagagcgagaa      g  aga  ca   a   -a    gaa  gc   gaa 
                      agcgcg ga   gc  gag cgc  gcga   cg  gac   c
                      |||||| ||   ||  ||| |||  ||||   ||  |||   g
                      UUGCGU UU   CG  UUC GCG  cguu   gc  cug   a
------------------cgUG      G  -GG  AG   A   Ag    -aa  gu   aga 

Annotation confidence Not enough data

Genome context

Unknown

Mature rmi-miR-5329

• Accession: MIMAT0021402
• Description: Rhipicephalus microplus rmi-miR-5329 mature miRNA
• Sequence: 84 - AGCGACUUGAGCGGUUGUGCGUUGU - 108
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21699734
   Evolutionary conserved microRNAs are ubiquitously expressed compared to tick-specific miRNAs in the cattle tick Rhipicephalus (Boophilus) microplus
   Barrero RA, Keeble-Gagnère G, Zhang B, Moolhuijzen P, Ikeo K, Tateno Y, Gojobori T, Guerrero FD, Lew-Tabor A, Bellgard M
   BMC Genomics (2011) 12:328