Stem-loop rmi-mir-5322

Accession

MI0018504

Description

Rhipicephalus microplus rmi-mir-5322 precursor miRNA

Sequence

ucauuugccacuuaaggcaccauugaugaauacgugcaagaucagccugcaauucaaggacaucauguucuuucugaauuuUUCUGUAGACUACGCAAUCAUCAGCAAagagcc
.....((((......))))...(((((((...((((......(((.....((((((((((((...))))))...))))))...))).....))))...))))))).........

Structure

ucauuugccacuuaaggcacca       aua    caagau   ccugc      ---      u 
                      uugauga   cgug      cag     aauuca   aggaca  
                      |||||||   ||||      |||     ||||||   |||||| c
                      GACUACU   GCAU      GUC     uuaagu   ucuugu  
-------------ccgagaAAC       AAC    -CAGAU   --UUu      cuu      a 

Annotation confidence Low

Genome context

Unknown

Mature rmi-miR-5322

• Accession: MIMAT0021395
• Description: Rhipicephalus microplus rmi-miR-5322 mature miRNA
• Sequence: 82 - UUCUGUAGACUACGCAAUCAUCAGCAA - 108
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21699734
   Evolutionary conserved microRNAs are ubiquitously expressed compared to tick-specific miRNAs in the cattle tick Rhipicephalus (Boophilus) microplus
   Barrero RA, Keeble-Gagnère G, Zhang B, Moolhuijzen P, Ikeo K, Tateno Y, Gojobori T, Guerrero FD, Lew-Tabor A, Bellgard M
   BMC Genomics (2011) 12:328