Stem-loop rmi-mir-5332

Accession

MI0018514

Description

Rhipicephalus microplus rmi-mir-5332 precursor miRNA

Sequence

gggcaauaucaggccuucggacUCGUCCUGUCGGCGUCAAGUCGUAGCAgccuucggccauccacucggcguaauagcgcuugacaugcgcuuugaagggcuuguuaagc
((((........))))...(((..(((((...((((.((.((((.(((.((.....(((........)))......))))))))).))))))....)))))..)))....

Structure

gggcaauaucaggccuucg   UC     -GUC    U  A    U   A  -cuucg   auc 
                   gac  GUCCU    GGCG CA GUCG AGC gc      gcc   c
                   |||  |||||    |||| || |||| ||| ||      |||    
                   uug  cggga    ucgc gu cagu ucg cg      cgg   a
---------------cgaa   uu     aguu    -  a    -   -  auaaug   cuc 

Annotation confidence Not enough data

Genome context

Unknown

Mature rmi-miR-5332

• Accession: MIMAT0021405
• Description: Rhipicephalus microplus rmi-miR-5332 mature miRNA
• Sequence: 23 - UCGUCCUGUCGGCGUCAAGUCGUAGCA - 49
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21699734
   Evolutionary conserved microRNAs are ubiquitously expressed compared to tick-specific miRNAs in the cattle tick Rhipicephalus (Boophilus) microplus
   Barrero RA, Keeble-Gagnère G, Zhang B, Moolhuijzen P, Ikeo K, Tateno Y, Gojobori T, Guerrero FD, Lew-Tabor A, Bellgard M
   BMC Genomics (2011) 12:328