Stem-loop rmi-mir-5321

Accession

MI0018503

Description

Rhipicephalus microplus rmi-mir-5321 precursor miRNA

Sequence

uucccguuuagaggauauuagcaaccaugaaaguguguggugccggaucaauuucUAUGGAAAAAGCAUAUUCUUGGGCGCaguguaucguccaccaaacucuu
..........((.(((((..((..(((.(((.((((......(((((......)))..)).....)))).))).)))..))...))))).))............

Structure

--uucccguuua  g     -ua  aa   u   a    guggug  --   uc 
            ga gauau   gc  cca gaa gugu      cc  gga  a
            || |||||   ||  ||| ||| ||||      ||  |||   
            cu cuaug   CG  GGU CUU UACG      GG  Ucu  a
uucucaaaccac  g     uga  CG   U   A    -AAAAA  UA   uu 

Annotation confidence Not enough data

Genome context

Unknown

Mature rmi-miR-5321

• Accession: MIMAT0021394
• Description: Rhipicephalus microplus rmi-miR-5321 mature miRNA
• Sequence: 56 - UAUGGAAAAAGCAUAUUCUUGGGCGC - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21699734
   Evolutionary conserved microRNAs are ubiquitously expressed compared to tick-specific miRNAs in the cattle tick Rhipicephalus (Boophilus) microplus
   Barrero RA, Keeble-Gagnère G, Zhang B, Moolhuijzen P, Ikeo K, Tateno Y, Gojobori T, Guerrero FD, Lew-Tabor A, Bellgard M
   BMC Genomics (2011) 12:328