Stem-loop rmi-mir-5319

Accession

MI0018501

Description

Rhipicephalus microplus rmi-mir-5319 precursor miRNA

Sequence

caccuacuugcagcugcagaaagcaguuguuuugggaggacacugcuguauguuagacaacaagCAGGCCUUUCCAGAAUGACUGCuuuucgagucugccugcgaguggu
...((((((((((..((((((((((((((((((((((((.(.(((((((.(((...))))).)))))).)))))))))))))))))))......))))))))))))))).

Structure

cac          cu     ------                   a a     -  a   u 
   cuacuugcag  gcaga      aagcaguuguuuugggagg c cugcu gu ugu  
   ||||||||||  |||||      ||||||||||||||||||| | ||||| || ||| a
   ggugagcguc  cgucu      uuCGUCAGUAAGACCUUUC G GACga ca aca  
--u          --     gagcuu                   C -     a  -   g 

Annotation confidence Not enough data

Genome context

Unknown

Mature rmi-miR-5319

• Accession: MIMAT0021392
• Description: Rhipicephalus microplus rmi-miR-5319 mature miRNA
• Sequence: 65 - CAGGCCUUUCCAGAAUGACUGC - 86
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21699734
   Evolutionary conserved microRNAs are ubiquitously expressed compared to tick-specific miRNAs in the cattle tick Rhipicephalus (Boophilus) microplus
   Barrero RA, Keeble-Gagnère G, Zhang B, Moolhuijzen P, Ikeo K, Tateno Y, Gojobori T, Guerrero FD, Lew-Tabor A, Bellgard M
   BMC Genomics (2011) 12:328