Stem-loop isc-mir-5305

Accession

MI0018484

Description

Ixodes scapularis isc-mir-5305 precursor miRNA

Sequence

acggcgggcauuuggcggacucuaaguuaaucuccaagcccaaugguaauucucgucaaUUGGGCUUGAAGAUUAGCUUAGaccccgccaaauacaucacacgu
((((.(((.(((((((((..(((((((((((((.((((((((((..............)))))))))).)))))))))))))..))))))))).).)).).)))

Structure

   - c  - c         ac             c          gguaau 
acg g gg g auuuggcgg  ucuaaguuaaucu caagcccaau      u
||| | || | |||||||||  ||||||||||||| ||||||||||       
ugc c cu c uaaaccgcc  aGAUUCGAUUAGA GUUCGGGUUa      c
   a a  a a         cc             A          acugcu 

Annotation confidence Not enough data

Genome context

DS696092: 157384-157487 [+]

Mature isc-miR-5305

• Accession: MIMAT0021375
• Description: Ixodes scapularis isc-miR-5305 mature miRNA
• Sequence: 60 - UUGGGCUUGAAGAUUAGCUUAG - 81
• Evidence: not_experimental

References

1. PubMed ID: 21699734
   Evolutionary conserved microRNAs are ubiquitously expressed compared to tick-specific miRNAs in the cattle tick Rhipicephalus (Boophilus) microplus
   Barrero RA, Keeble-Gagnère G, Zhang B, Moolhuijzen P, Ikeo K, Tateno Y, Gojobori T, Guerrero FD, Lew-Tabor A, Bellgard M
   BMC Genomics (2011) 12:328