Stem-loop asu-mir-36a

Accession

MI0018536

Description

Ascaris suum asu-mir-36a precursor miRNA

Sequence

cgguguguAGUGGAUGUACCCUCGGUUCGAUGuuucuuuacuaucaUCACCGGGUAUACAUUCAUCAAauaccguagcuca
((((((...(((((((((..((((((..((((............))))))))))..)))))))))...)))))).......

Structure

-------      guA         CC      UC    uuucu 
       cggugu   GUGGAUGUA  CUCGGU  GAUG     u
       ||||||   |||||||||  ||||||  ||||      
       gccaua   UACUUACAU  GGGCCA  CUac     u
acucgau      AAC         AU      --    uauca 

Annotation confidence Low

Genome context

Unknown

Mature asu-miR-36a-5p

• Accession: MIMAT0021439
• Description: Ascaris suum asu-miR-36a-5p mature miRNA
• Sequence: 9 - AGUGGAUGUACCCUCGGUUCGAUG - 32
• Evidence: experimental ; Illumina [1]

Mature asu-miR-36a-3p

• Accession: MIMAT0021440
• Description: Ascaris suum asu-miR-36a-3p mature miRNA
• Sequence: 47 - UCACCGGGUAUACAUUCAUCAA - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21685128
   Deep small RNA sequencing from the nematode Ascaris reveals conservation, functional diversification, and novel developmental profiles
   "Wang J, Czech B, Crunk A, Wallace A, Mitreva M, Hannon GJ, Davis RE"
   "Genome Res (2011) 21:1462-1477