Stem-loop asu-mir-36e

Accession

MI0018540

Description

Ascaris suum asu-mir-36e precursor miRNA

Sequence

augugacgugaCGGGGAUUCUACUCUUGGUGAAGcgagcucagaugacuUCACCGGGCUCGAAUCCUUGUCcugucaugau
..((((((.(((((((((((....((((((((((((........)).))))))))))...))))))))))).))))))...

Structure

-au      u           UACU          -  agc 
   gugacg gaCGGGGAUUC    CUUGGUGAAG cg   u
   |||||| |||||||||||    |||||||||| ||    
   uacugu CUGUUCCUAAG    GGGCCACUuc gu   c
uag      c           -CUC          a  aga 

Annotation confidence Not enough data

Genome context

Unknown

Mature asu-miR-36e-5p

• Accession: MIMAT0021447
• Description: Ascaris suum asu-miR-36e-5p mature miRNA
• Sequence: 12 - CGGGGAUUCUACUCUUGGUGAAG - 34
• Evidence: experimental ; Illumina [1]

Mature asu-miR-36e-3p

• Accession: MIMAT0021448
• Description: Ascaris suum asu-miR-36e-3p mature miRNA
• Sequence: 50 - UCACCGGGCUCGAAUCCUUGUC - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21685128
   Deep small RNA sequencing from the nematode Ascaris reveals conservation, functional diversification, and novel developmental profiles
   "Wang J, Czech B, Crunk A, Wallace A, Mitreva M, Hannon GJ, Davis RE"
   "Genome Res (2011) 21:1462-1477