Stem-loop asu-mir-81a

Accession

MI0018555

Description

Ascaris suum asu-mir-81a precursor miRNA

Sequence

acgggcacuaggccuucacugugaaucugcagaaugccuguuauacugucUGAGAUCAUUGUGAAAGCUAUUugccuugcuug
..(((((...(((.(((((.((((.(((.((((..(.........)..))))))))))).))))).)))...)))))......

Structure

----ac     cua   c     u    a   g    au ccu 
      gggca   ggc uucac guga ucu caga  g   g
      |||||   ||| ||||| |||| ||| ||||  |   u
      uccgu   UCG AAGUG UACU AGA GUcu  c   u
guucgu     UUA   A     U    -   -    gu aua 

Annotation confidence Low

Genome context

Unknown

Mature asu-miR-81a

• Accession: MIMAT0021474
• Description: Ascaris suum asu-miR-81a mature miRNA
• Sequence: 51 - UGAGAUCAUUGUGAAAGCUAUU - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21685128
   Deep small RNA sequencing from the nematode Ascaris reveals conservation, functional diversification, and novel developmental profiles
   "Wang J, Czech B, Crunk A, Wallace A, Mitreva M, Hannon GJ, Davis RE"
   "Genome Res (2011) 21:1462-1477