Stem-loop asu-mir-234

Accession

MI0018569

Description

Ascaris suum asu-mir-234 precursor miRNA

Sequence

agcaaaAGGUAUUCUCCGGUAAUGACAuagugcauugaaagcugUUAUUGCUUGAGAAUACAAAUuguuguccggc
(((((...((((((((.((((((((((....((.......)))))))))))).))))))))...))))).......

Structure

-------     aAG        C          uagu  au 
       agcaa   GUAUUCUC GGUAAUGACA    gc  u
       |||||   |||||||| ||||||||||    ||  g
       uuguU   CAUAAGAG UCGUUAUUgu    cg  a
cggccug     AAA        U          ----  aa 

Annotation confidence Low

Genome context

Unknown

Mature asu-miR-234-5p

• Accession: MIMAT0021499
• Description: Ascaris suum asu-miR-234-5p mature miRNA
• Sequence: 7 - AGGUAUUCUCCGGUAAUGACA - 27
• Evidence: experimental ; Illumina [1]

Mature asu-miR-234-3p

• Accession: MIMAT0021500
• Description: Ascaris suum asu-miR-234-3p mature miRNA
• Sequence: 45 - UUAUUGCUUGAGAAUACAAAU - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21685128
   Deep small RNA sequencing from the nematode Ascaris reveals conservation, functional diversification, and novel developmental profiles
   "Wang J, Czech B, Crunk A, Wallace A, Mitreva M, Hannon GJ, Davis RE"
   "Genome Res (2011) 21:1462-1477