Stem-loop asu-mir-252

Accession

MI0018574

Description

Ascaris suum asu-mir-252 precursor miRNA

Sequence

gggaccagcCUAAGUAGUAGUGCCGCAGGUAAcaugacuugggauuACCUGCUCCCUGCUGCUUAACUugguaccgcuuuacg
((.(((((..((((((((((.(..((((((((((.....))...))))))))..)))))))))))..))))).))........

Structure

--------  g     cC          U CC        ---  u 
        gg accag  UAAGUAGUAG G  GCAGGUAA   ca g
        || |||||  |||||||||| |  ||||||||   || a
        cc ugguU  AUUCGUCGUC C  CGUCCAuu   gu c
gcauuucg  a     CA          - CU        agg  u 

Annotation confidence Low

Genome context

Unknown

Mature asu-miR-252-5p

• Accession: MIMAT0021509
• Description: Ascaris suum asu-miR-252-5p mature miRNA
• Sequence: 10 - CUAAGUAGUAGUGCCGCAGGUAA - 32
• Evidence: experimental ; Illumina [1]

Mature asu-miR-252-3p

• Accession: MIMAT0021510
• Description: Ascaris suum asu-miR-252-3p mature miRNA
• Sequence: 47 - ACCUGCUCCCUGCUGCUUAACU - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21685128
   Deep small RNA sequencing from the nematode Ascaris reveals conservation, functional diversification, and novel developmental profiles
   "Wang J, Czech B, Crunk A, Wallace A, Mitreva M, Hannon GJ, Davis RE"
   "Genome Res (2011) 21:1462-1477