Stem-loop asu-mir-993

Accession

MI0018585

Description

Ascaris suum asu-mir-993 precursor miRNA

Sequence

cggaugguuuACCCUGUAGAAGCGUGUUUAUCugcacauuucaaaaUAAGCUCGUCUCUACAGGCAGGaccuuccag
.(((.(((((..((((((((.(((.((((((..............)))))).))).))))))))..))))).)))..

Structure

-c   u     AC        A   U      Cugcac 
  gga gguuu  CCUGUAGA GCG GUUUAU      a
  ||| |||||  |||||||| ||| ||||||       
  ccu ccaGG  GGACAUCU UGC CGAAUa      u
ga   u     AC        C   U      aaacuu 

Annotation confidence Low

Genome context

Unknown

Mature asu-miR-993-5p

• Accession: MIMAT0021531
• Description: Ascaris suum asu-miR-993-5p mature miRNA
• Sequence: 11 - ACCCUGUAGAAGCGUGUUUAUC - 32
• Evidence: experimental ; Illumina [1]

Mature asu-miR-993-3p

• Accession: MIMAT0021532
• Description: Ascaris suum asu-miR-993-3p mature miRNA
• Sequence: 47 - UAAGCUCGUCUCUACAGGCAGG - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21685128
   Deep small RNA sequencing from the nematode Ascaris reveals conservation, functional diversification, and novel developmental profiles
   "Wang J, Czech B, Crunk A, Wallace A, Mitreva M, Hannon GJ, Davis RE"
   "Genome Res (2011) 21:1462-1477