Stem-loop asu-mir-44b

Accession

MI0018602

Description

Ascaris suum asu-mir-44b precursor miRNA

Sequence

aguaagcuACUGGAUGUGUGUCAUAGUCAUGacgugugaucaacaUGACUAGAUAUCACAUUCAGUGGuauauuu
.(((.(((((((((((((((((.((((((((..(......)..)))))))))))).))))))))))))).)))..

Structure

-a   a             -    A        ac ug 
  gua gcuACUGGAUGUG UGUC UAGUCAUG  g  u
  ||| ||||||||||||| |||| ||||||||  |   
  uau uGGUGACUUACAC AUAG AUCAGUac  c  g
uu   a             U    -        aa ua 

Annotation confidence Low

Genome context

Unknown

Mature asu-miR-44b-5p

• Accession: MIMAT0021564
• Description: Ascaris suum asu-miR-44b-5p mature miRNA
• Sequence: 9 - ACUGGAUGUGUGUCAUAGUCAUG - 31
• Evidence: experimental ; Illumina [1]

Mature asu-miR-44b-3p

• Accession: MIMAT0021565
• Description: Ascaris suum asu-miR-44b-3p mature miRNA
• Sequence: 46 - UGACUAGAUAUCACAUUCAGUGG - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21685128
   Deep small RNA sequencing from the nematode Ascaris reveals conservation, functional diversification, and novel developmental profiles
   "Wang J, Czech B, Crunk A, Wallace A, Mitreva M, Hannon GJ, Davis RE"
   "Genome Res (2011) 21:1462-1477