Stem-loop asu-mir-5355

Accession

MI0018605

Description

Ascaris suum asu-mir-5355 precursor miRNA

Sequence

caccgauucUGAACACCUCAAGAGAUACAACGcuguuauugguaacgGUGUGCCCCUUGAGGUGUUUAGAaugauggugua
((((((((((((((((((((((.(.....(((((((((....)))))))))...))))))))))))))))))..)))))..

Structure

--     --                 A AUACA         u 
  caccg  auucUGAACACCUCAAG G     ACGcuguua u
  |||||  ||||||||||||||||| |     |||||||||  
  guggu  uaAGAUUUGUGGAGUUC C     UGUGgcaau g
au     ag                 - --CCG         g 

Annotation confidence Low

Genome context

Unknown

Mature asu-miR-5355-5p

• Accession: MIMAT0021570
• Description: Ascaris suum asu-miR-5355-5p mature miRNA
• Sequence: 10 - UGAACACCUCAAGAGAUACAACG - 32
• Evidence: experimental ; Illumina [1]

Mature asu-miR-5355-3p

• Accession: MIMAT0021571
• Description: Ascaris suum asu-miR-5355-3p mature miRNA
• Sequence: 48 - GUGUGCCCCUUGAGGUGUUUAGA - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21685128
   Deep small RNA sequencing from the nematode Ascaris reveals conservation, functional diversification, and novel developmental profiles
   "Wang J, Czech B, Crunk A, Wallace A, Mitreva M, Hannon GJ, Davis RE"
   "Genome Res (2011) 21:1462-1477