Stem-loop asu-mir-5358a

Accession

MI0018609

Description

Ascaris suum asu-mir-5358a precursor miRNA

Sequence

ggugugggaggCGGUUAUGGUAUUGCGCUGGUAUGuugauucuguguucaUACCCGUAAUUGCCAUGACUGUUucccgcucc
((.((((((((((((((((((((((((..((((((.............))))))))))).))))))))))))))))))).))

Structure

  u                   -     CU      uugau 
gg gugggaggCGGUUAUGGUA UUGCG  GGUAUG     u
|| ||||||||||||||||||| |||||  ||||||     c
cc cgcccuUUGUCAGUACCGU AAUGC  CCAUac     u
  u                   U     --      uugug 

Annotation confidence Low

Genome context

Unknown

Mature asu-miR-5358a-5p

• Accession: MIMAT0021578
• Description: Ascaris suum asu-miR-5358a-5p mature miRNA
• Sequence: 12 - CGGUUAUGGUAUUGCGCUGGUAUG - 35
• Evidence: experimental ; Illumina [1]

Mature asu-miR-5358a-3p

• Accession: MIMAT0021579
• Description: Ascaris suum asu-miR-5358a-3p mature miRNA
• Sequence: 51 - UACCCGUAAUUGCCAUGACUGUU - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21685128
   Deep small RNA sequencing from the nematode Ascaris reveals conservation, functional diversification, and novel developmental profiles
   "Wang J, Czech B, Crunk A, Wallace A, Mitreva M, Hannon GJ, Davis RE"
   "Genome Res (2011) 21:1462-1477