Stem-loop asu-mir-5361

Accession

MI0018612

Description

Ascaris suum asu-mir-5361 precursor miRNA

Sequence

gcucgaauuUGGGAUAUCUUGGAAGGUUUCUcgguuuuuaugggcggAAAGCUUCCAUUUUGUCCCUGAuucuau
....(((((.((((((...((((((.((((.((.((.....)).)))))).))))))...)))))).)))))...

Structure

gcuc     U      UCU      G    U  g  u 
    gaauu GGGAUA   UGGAAG UUUC cg uu u
    ||||| ||||||   |||||| |||| || || u
    cuuAG CCCUGU   ACCUUC AAAg gc gg a
-uau     U      UUU      G    -  g  u 

Annotation confidence Not enough data

Genome context

Unknown

Mature asu-miR-5361-5p

• Accession: MIMAT0021584
• Description: Ascaris suum asu-miR-5361-5p mature miRNA
• Sequence: 10 - UGGGAUAUCUUGGAAGGUUUCU - 31
• Evidence: experimental ; Illumina [1]

Mature asu-miR-5361-3p

• Accession: MIMAT0021585
• Description: Ascaris suum asu-miR-5361-3p mature miRNA
• Sequence: 48 - AAAGCUUCCAUUUUGUCCCUGA - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21685128
   Deep small RNA sequencing from the nematode Ascaris reveals conservation, functional diversification, and novel developmental profiles
   "Wang J, Czech B, Crunk A, Wallace A, Mitreva M, Hannon GJ, Davis RE"
   "Genome Res (2011) 21:1462-1477