Stem-loop asu-mir-5366

Accession

MI0018617

Description

Ascaris suum asu-mir-5366 precursor miRNA

Sequence

cacgagcacgUAAAUGCACUGUGUUGCUAAUUuggcucaucgaaaaUUAGCAGCAUGGCGCAUUUGCGcgccaauggccaaau
.....((.(((((((((.(((((((((((((((..........))))))))))))))).))))))))).))............

Structure

-------cacga  a         A               ggcu 
            gc cgUAAAUGC CUGUGUUGCUAAUUu    c
            || ||||||||| |||||||||||||||     
            cg GCGUUUACG GGUACGACGAUUaaa    a
uaaaccgguaac  c         C               agcu 

Annotation confidence Low

Genome context

Unknown

Mature asu-miR-5366-5p

• Accession: MIMAT0021594
• Description: Ascaris suum asu-miR-5366-5p mature miRNA
• Sequence: 11 - UAAAUGCACUGUGUUGCUAAUU - 32
• Evidence: experimental ; Illumina [1]

Mature asu-miR-5366-3p

• Accession: MIMAT0021595
• Description: Ascaris suum asu-miR-5366-3p mature miRNA
• Sequence: 47 - UUAGCAGCAUGGCGCAUUUGCG - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21685128
   Deep small RNA sequencing from the nematode Ascaris reveals conservation, functional diversification, and novel developmental profiles
   "Wang J, Czech B, Crunk A, Wallace A, Mitreva M, Hannon GJ, Davis RE"
   "Genome Res (2011) 21:1462-1477