Stem-loop asu-mir-5358b

Accession

MI0018619

Description

Ascaris suum asu-mir-5358b precursor miRNA

Sequence

ugucggcaaCCAUGUUGGUGCGUCGUGGUAUGcugaugguguauucaUACCCGUAAUGCCAACAUGCAUgcuugcac
(((.((((..((((((((((...((.((((((..((((...))))))))))))...))))))))))..)))).))).

Structure

-   c    aC          CGU  U      cu    g 
 ugu ggca  CAUGUUGGUG   CG GGUAUG  gaug  
 ||| ||||  ||||||||||   || ||||||  |||| u
 acg ucgU  GUACAACCGU   GC CCAUac  uuau  
c   u    AC          AAU  -      --    g 

Annotation confidence Not enough data

Genome context

Unknown

Mature asu-miR-5358b-5p

• Accession: MIMAT0021598
• Description: Ascaris suum asu-miR-5358b-5p mature miRNA
• Sequence: 10 - CCAUGUUGGUGCGUCGUGGUAUG - 32
• Evidence: experimental ; Illumina [1]

Mature asu-miR-5358b-3p

• Accession: MIMAT0021599
• Description: Ascaris suum asu-miR-5358b-3p mature miRNA
• Sequence: 48 - UACCCGUAAUGCCAACAUGCAU - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21685128
   Deep small RNA sequencing from the nematode Ascaris reveals conservation, functional diversification, and novel developmental profiles
   "Wang J, Czech B, Crunk A, Wallace A, Mitreva M, Hannon GJ, Davis RE"
   "Genome Res (2011) 21:1462-1477