Stem-loop asu-mir-5367

Accession

MI0018620

Description

Ascaris suum asu-mir-5367 precursor miRNA

Sequence

aaggccaaaGCGGCCUCAGAUCUUGCCAAUUUuucaaugcgguuaaAUUGGCACCUCUUAGACCGGCUuggagcg
....((((..(((.((.(((...(((((((((..(......)..)))))))))..))).)).)))..))))....

Structure

aagg    aG   C  C   UCU         uu aa 
    ccaa  CGG CU AGA   UGCCAAUUU  c  u
    ||||  ||| || |||   |||||||||  |   
    gguU  GCC GA UCU   ACGGUUAaa  g  g
gcga    CG   A  U   -CC         uu gc 

Annotation confidence Not enough data

Genome context

Unknown

Mature asu-miR-5367-5p

• Accession: MIMAT0021600
• Description: Ascaris suum asu-miR-5367-5p mature miRNA
• Sequence: 10 - GCGGCCUCAGAUCUUGCCAAUUU - 32
• Evidence: experimental ; Illumina [1]

Mature asu-miR-5367-3p

• Accession: MIMAT0021601
• Description: Ascaris suum asu-miR-5367-3p mature miRNA
• Sequence: 47 - AUUGGCACCUCUUAGACCGGCU - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21685128
   Deep small RNA sequencing from the nematode Ascaris reveals conservation, functional diversification, and novel developmental profiles
   "Wang J, Czech B, Crunk A, Wallace A, Mitreva M, Hannon GJ, Davis RE"
   "Genome Res (2011) 21:1462-1477