Stem-loop aca-mir-5393

Accession

MI0018700

Description

Anolis carolinensis aca-mir-5393 precursor miRNA

Sequence

gauuugcguuUUGAGUUGGUUCAGAAGAGCUuaugagaaacaauuuauuucuacauauucucuuuuugaaccuucucuagaccagcuu
...(((.((((.(((..((((((((((((..(((((((((.......))))).))))..))).)))))))))..))).)))))))...

Structure

gau   c    U   UU         -   CU    -     ca 
   uug guuU GAG  GGUUCAGAA GAG  uaug agaaa  a
   ||| |||| |||  ||||||||| |||  |||| |||||  u
   gac caga cuc  ccaaguuuu cuc  auac ucuuu  u
uuc   -    u   uu         u   uu    a     au 

Annotation confidence Not enough data

Genome context

GL343221.1: 2561489-2561576 [-]

Mature aca-miR-5393

• Accession: MIMAT0021691
• Description: Anolis carolinensis aca-miR-5393 mature miRNA
• Sequence: 11 - UUGAGUUGGUUCAGAAGAGCU - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107