Stem-loop aca-let-7a

Accession

MI0018701

Description

Anolis carolinensis aca-let-7a precursor miRNA

Literature search

1 open access papers mention aca-let-7a
(1 sentences)

Sequence

cugcacugugggaUGAGGUAGUAGGUUGUAUAGUUuuagggucauacccaccacugggagauaaCUAUACAGUCUACUGUCUUUCcuaaagaggcagaaaa
((((.((.(((((.(((((((((((((((((((((.....(((...((((....)))).))))))))))))))))))))))))))))).))..))))....

Structure

----    -a  g     U                     uuagg   aua    c 
    cugc  cu uggga GAGGUAGUAGGUUGUAUAGUU     guc   ccca c
    ||||  || ||||| |||||||||||||||||||||     |||   ||||  
    gacg  ga aucCU UUCUGUCAUCUGACAUAUCaa     uag   gggu a
aaaa    ga  a     -                     -----   --a    c 

Annotation confidence Not enough data

Genome context

GL343225.1: 748885-748985 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from aca-let-7a

Mature aca-let-7a-5p

• Accession: MIMAT0021692
• Description: Anolis carolinensis aca-let-7a-5p mature miRNA
• Sequence: 14 - UGAGGUAGUAGGUUGUAUAGUU - 35
• Evidence: experimental ; Illumina [1]

Mature aca-let-7a-3p

• Accession: MIMAT0021693
• Description: Anolis carolinensis aca-let-7a-3p mature miRNA
• Sequence: 65 - CUAUACAGUCUACUGUCUUUC - 85
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107