Stem-loop aca-let-7f-2

Accession

MI0018708

Description

Anolis carolinensis aca-let-7f-2 precursor miRNA

Literature search

1 open access papers mention aca-let-7f-2
(1 sentences)

Sequence

uucucuuuaucagguUGAGGUAGUAGAUUGUAUAGUUguagggcaguuauuuugcccucuucaggagauaaCUAUACAAUCUAUUGCCUUCCcugaggaguaacauu
..((((...(((((..((((((((((((((((((((((((((((((.....))))))).........))))))))))))))))))))))).))))))))).......

Structure

-----uu    uua     uU                       ---------       u 
       cucu   ucagg  GAGGUAGUAGAUUGUAUAGUUgu         agggcag u
       ||||   |||||  |||||||||||||||||||||||         ||||||| a
       gagg   agucC  UUCCGUUAUCUAACAUAUCaaua         ucccguu u
uuacaau    ---     -C                       gaggacuuc       u 

Annotation confidence Low

Genome context

GL343225.1: 748285-748391 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from aca-let-7f-2

Mature aca-let-7f-5p

• Accession: MIMAT0021703
• Description: Anolis carolinensis aca-let-7f-5p mature miRNA
• Sequence: 16 - UGAGGUAGUAGAUUGUAUAGUU - 37
• Evidence: experimental ; Illumina [1]

Mature aca-let-7f-2-3p

• Accession: MIMAT0021705
• Description: Anolis carolinensis aca-let-7f-2-3p mature miRNA
• Sequence: 72 - CUAUACAAUCUAUUGCCUUCC - 92
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107