Stem-loop aca-let-7g

Accession

MI0018709

Description

Anolis carolinensis aca-let-7g precursor miRNA

Literature search

2 open access papers mention aca-let-7g
(2 sentences)

Sequence

81597 reads, 28186.0 reads per million, 2 experiments

uugccugauuccggguUGAGGUAGUAGUUUGUACAGUUugagggucuaugauaccacccgguacaggagauaaCUGUACAGGCCACUGCCUUGCcuggggcagagcuuu
..(((((.((((((((.((((((((.((((((((((((.....((((.((.((((....))))))..)))))))))))))))).))))))))))))))))))).))...

Structure

-uu  -   a        U        A            ugagg    -a  a    a 
   gc cug uuccgggu GAGGUAGU GUUUGUACAGUU     gucu  ug uacc c
   || ||| |||||||| |||||||| ||||||||||||     ||||  || ||||  
   cg gac ggggucCG UUCCGUCA CGGACAUGUCaa     uaga  ac augg c
uuu  a   -        -        C            -----    gg  -    c 

Annotation confidence High

Genome context

chr2: 153332754-153332862 [+]

Mature aca-let-7g-5p

• Accession: MIMAT0021706
• Description: Anolis carolinensis aca-let-7g-5p mature miRNA
• Sequence: 17 - UGAGGUAGUAGUUUGUACAGUU - 38
• Evidence: experimental ; Illumina [1]

Mature aca-let-7g-3p

• Accession: MIMAT0060811
• Description: Anolis carolinensis aca-let-7g-3p mature miRNA
• Sequence: 74 - CUGUACAGGCCACUGCCUUGC - 94

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107