Stem-loop aca-let-7i

Accession

MI0018710

Description

Anolis carolinensis aca-let-7i precursor miRNA

Literature search

2 open access papers mention aca-let-7i
(31 sentences)

Sequence

55746 reads, 18999.0 reads per million, 2 experiments

gcaccacggcccuggcUGAGGUAGUAGUUUGUGCUGUUggucggguugugacauugcccgcuguggagauaaCUGCGCAAGCUACUGCCUUGCUagugcuggugaugaucgg
.(((((..((.(((((.(((((((((((((((((.(((((.(((((.........)))))))........))).)))))))))))))))))))))).)))))))........

Structure

-------g     cg  c     U                 U   --------  u     ugu 
        cacca  gc cuggc GAGGUAGUAGUUUGUGC GUU        gg cgggu   g
        |||||  || ||||| ||||||||||||||||| |||        || |||||   a
        guggu  cg gaUCG UUCCGUCAUCGAACGCG Caa        uc gcccg   c
ggcuagua     --  u     -                 U   uagaggug  -     uua 

Annotation confidence High

Genome context

chr5: 51075540-51075651 [-]

Mature aca-let-7i-5p

• Accession: MIMAT0021707
• Description: Anolis carolinensis aca-let-7i-5p mature miRNA
• Sequence: 17 - UGAGGUAGUAGUUUGUGCUGUU - 38
• Evidence: experimental ; Illumina [1]

Mature aca-let-7i-3p

• Accession: MIMAT0021708
• Description: Anolis carolinensis aca-let-7i-3p mature miRNA
• Sequence: 73 - CUGCGCAAGCUACUGCCUUGCU - 94
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107