Stem-loop aca-mir-101-1

Accession

MI0018712

Description

Anolis carolinensis aca-mir-101-1 precursor miRNA

Sequence

2566 reads, 881.0 reads per million, 2 experiments

gcugcccuggcUCAGUUAUCACUGUGCUGAUGCUGucuauacuaaagGUACAGUACUGUGAUAACUGAAggauggcagc
((((((.....(((((((((((.((((((.((((............)))))))))).))))))))))).....))))))

Structure

      cuggc           U      A    Gucua 
gcugcc     UCAGUUAUCAC GUGCUG UGCU     u
||||||     ||||||||||| |||||| ||||      
cgacgg     AGUCAAUAGUG CAUGAC AUGg     a
      uaggA           U      -    aaauc 

Annotation confidence High

Genome context

chr4: 98411443-98411521 [+]

Mature aca-miR-101-1-5p

• Accession: MIMAT0021710
• Description: Anolis carolinensis aca-miR-101-1-5p mature miRNA
• Sequence: 12 - UCAGUUAUCACUGUGCUGAUGCUG - 35
• Evidence: experimental ; Illumina [1]

Mature aca-miR-101-3p

• Accession: MIMAT0021711
• Description: Anolis carolinensis aca-miR-101-3p mature miRNA
• Sequence: 48 - GUACAGUACUGUGAUAACUGAA - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107