Stem-loop aca-mir-103

Accession

MI0018715

Description

Anolis carolinensis aca-mir-103 precursor miRNA

Sequence

4689 reads, 1622.0 reads per million, 2 experiments

uauuucucgcugccuucAGCUUCUUUACAGUGCUGCCUUGUugcuuauggaucaAGCAGCAUUGUACAGGGCUAUgaaggcauugaguacugcuuca
.....((((.(((((((((((.((.(((((((((((.(((.(.(....).).)))))))))))))).)))))..)))))))).))))..........

Structure

-----uauuu    c        --   U  U           C   U g u 
          cucg ugccuucA  GCU CU UACAGUGCUGC UUG u c u
          |||| ||||||||  ||| || ||||||||||| ||| | |  
          gagu acggaagU  CGG GA AUGUUACGACG Aac a g a
acuucgucau    u        AU   -  C           -   u g u 

Annotation confidence High

Genome context

chr2: 189292145-189292241 [+]

Mature aca-miR-103-5p

• Accession: MIMAT0021715
• Description: Anolis carolinensis aca-miR-103-5p mature miRNA
• Sequence: 18 - AGCUUCUUUACAGUGCUGCCUUGU - 41
• Evidence: experimental ; Illumina [1]

Mature aca-miR-103-3p

• Accession: MIMAT0021716
• Description: Anolis carolinensis aca-miR-103-3p mature miRNA
• Sequence: 55 - AGCAGCAUUGUACAGGGCUAU - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107