Stem-loop aca-mir-10a

Accession

MI0018716

Description

Anolis carolinensis aca-mir-10a precursor miRNA

Sequence

56215 reads, 18769.0 reads per million, 2 experiments

guaugUACCCUGUAGAUCCGAAUUUGUguaaaagaaacugcgucACAAAUUCGCGUCUAGGGGAAUauguaguagacacaaac
.(((((.((((.(((((.((((((((((....((...))....)))))))))).))))))))).)))))..............

Structure

-------------g     A    G     C          uaaa  a 
              uaugU CCCU UAGAU CGAAUUUGUg    ag  
              ||||| |||| ||||| ||||||||||    || a
              guaUA GGGG AUCUG GCUUAAACAc    uc  
caaacacagaugau     A    -     C          ugcg  a 

Annotation confidence High

Genome context

chr6: 75570711-75570793 [-]

Mature aca-miR-10a-5p

• Accession: MIMAT0021717
• Description: Anolis carolinensis aca-miR-10a-5p mature miRNA
• Sequence: 6 - UACCCUGUAGAUCCGAAUUUGU - 27
• Evidence: experimental ; Illumina [1]

Mature aca-miR-10a-3p

• Accession: MIMAT0021718
• Description: Anolis carolinensis aca-miR-10a-3p mature miRNA
• Sequence: 45 - ACAAAUUCGCGUCUAGGGGAAU - 66
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107