Stem-loop aca-mir-124a-2

Accession

MI0018721

Description

Anolis carolinensis aca-mir-124a-2 precursor miRNA

Literature search

1 open access papers mention aca-mir-124a-2
(2 sentences)

Sequence

19875 reads, 7073.0 reads per million, 2 experiments

cccucccgggcccuucucugcguguucacagcggaccuugauuuaauguccauacaauUAAGGCACGCGGUGAAUGCCAagagagcggcucucaagacauc
.......(((((.((((((..((((((((.(((..((((((((............))))))))..))).))))))))..)))))).)))))..........

Structure

---cccuccc     c      gc        a   ga        uaaug 
          gggcc uucucu  guguucac gcg  ccuugauu     u
          ||||| ||||||  |||||||| |||  ||||||||      
          cucgg gagaga  CGUAAGUG CGC  GGAAUuaa     c
cuacagaacu     c      AC        G   AC        cauac 

Annotation confidence Not enough data

Genome context

chr4: 153195184-153195284 [+]

Mature aca-miR-124a-3p

• Accession: MIMAT0021725
• Description: Anolis carolinensis aca-miR-124a-3p mature miRNA
• Sequence: 59 - UAAGGCACGCGGUGAAUGCCA - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107