Stem-loop aca-mir-125b-1

Accession

MI0018725

Description

Anolis carolinensis aca-mir-125b-1 precursor miRNA

Literature search

1 open access papers mention aca-mir-125b-1
(1 sentences)

Sequence

42487 reads, 15009.0 reads per million, 2 experiments

ugcgccccucucugUCCCUGAGACCCUAACUUGUGAcguuuaguuuuuaaguccACGGGUUAGGCUCUUGGGAGCUgugaguugugccac
.((((..(((.(.((.(((((((.(((((((((((((.............)).))))))))))).))))))).)).).)))..))))...

Structure

--u    cc   u u  C       C           -  guuua 
   gcgc  cuc c gU CCUGAGA CCUAACUUGUG Ac     g
   ||||  ||| | || ||||||| ||||||||||| ||     u
   cgug  gag g CG GGGUUCU GGAUUGGGCAc ug     u
cac    uu   u U  A       C           c  aauuu 

Annotation confidence High

Genome context

CM000943.1: 2579058-2579147 [-]

Mature aca-miR-125b-5p

• Accession: MIMAT0021729
• Description: Anolis carolinensis aca-miR-125b-5p mature miRNA
• Sequence: 15 - UCCCUGAGACCCUAACUUGUGA - 36
• Evidence: experimental ; Illumina [1]

Mature aca-miR-125b-1-3p

• Accession: MIMAT0057905
• Description: Anolis carolinensis aca-miR-125b-1-3p mature miRNA
• Sequence: 55 - ACGGGUUAGGCUCUUGGGAGCU - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107