Stem-loop aca-mir-125b-2

Accession

MI0018726

Description

Anolis carolinensis aca-mir-125b-2 precursor miRNA

Literature search

1 open access papers mention aca-mir-125b-2
(1 sentences)

Sequence

37836 reads, 13413.0 reads per million, 2 experiments

cagacuuuuccuagUCCCUGAGACCCUAACUUGUGAgguuuuuaguaacaaucACAAGUCAGGCUCUUGGGACCUaggcggaggggaacc
....((((.(((((((((.((((.(((.((((((((.(((......)))..)))))))).))).)))))))).))))).)))).......

Structure

---caga    u     -    U    C   A        -g   uu 
       cuuu ccuag UCCC GAGA CCU ACUUGUGA  guu  u
       |||| ||||| |||| |||| ||| ||||||||  |||   
       gagg ggaUC AGGG UUCU GGA UGAACAcu  caa  a
ccaaggg    c     C    -    C   C        aa   ug 

Annotation confidence High

Genome context

chr3: 153990128-153990217 [-]

Mature aca-miR-125b-5p

• Accession: MIMAT0021729
• Description: Anolis carolinensis aca-miR-125b-5p mature miRNA
• Sequence: 15 - UCCCUGAGACCCUAACUUGUGA - 36
• Evidence: experimental ; Illumina [1]

Mature aca-miR-125b-2-3p

• Accession: MIMAT0057906
• Description: Anolis carolinensis aca-miR-125b-2-3p mature miRNA
• Sequence: 54 - ACAAGUCAGGCUCUUGGGACCU - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107