Stem-loop aca-mir-128-1

Accession

MI0018728

Description

Anolis carolinensis aca-mir-128-1 precursor miRNA

Sequence

cagcaauguacaguuggaagGGGGGCCGUUACACUGUAAGAgagugaguagcaggucUCACAGUGAACCGGUCUCUUUuccuacugugucacaucu
......((((((((.(((((((((((((...((((((..((((.(........).))))))))))...))))))))))))).)))))).)).....

Structure

cagcaa  -      u             UUA      AA    g gag 
      ug uacagu ggaagGGGGGCCG   CACUGU  GAga u   u
      || |||||| |||||||||||||   ||||||  |||| |    
      ac guguca ccuUUUCUCUGGC   GUGACA  CUcu g   a
-ucuac  u      u             CAA      --    g acg 

Annotation confidence Low

Genome context

chr6: 42720735-42720830 [+]

Mature aca-miR-128-5p

• Accession: MIMAT0021732
• Description: Anolis carolinensis aca-miR-128-5p mature miRNA
• Sequence: 21 - GGGGGCCGUUACACUGUAAGA - 41
• Evidence: experimental ; Illumina [1]

Mature aca-miR-128-3p

• Accession: MIMAT0021733
• Description: Anolis carolinensis aca-miR-128-3p mature miRNA
• Sequence: 58 - UCACAGUGAACCGGUCUCUUU - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107