Stem-loop aca-mir-128-2

Accession

MI0018729

Description

Anolis carolinensis aca-mir-128-2 precursor miRNA

Sequence

2655 reads, 928.0 reads per million, 2 experiments

auuccugagcuguuggauuCGGGGCCGUAACACUGUCUGAGAggguuacauuucUCACAGUGAACCGGUCUCUUUUucagcugcuuccuagcuu
......((((.((((((...(((((((...((((((..((((((......))))))))))))...)))))))...)))))).))))........

Structure

--auuccu    u      uuC       UAA      CU      gu 
        gagc guugga   GGGGCCG   CACUGU  GAGAgg  u
        |||| ||||||   |||||||   ||||||  ||||||   
        uucg cgacuU   CUCUGGC   GUGACA  CUcuuu  a
uucgaucc    u      UUU       CAA      --      ac 

Annotation confidence High

Genome context

chr1: 96668145-96668238 [+]

Mature aca-miR-128-2-5p

• Accession: MIMAT0057907
• Description: Anolis carolinensis aca-miR-128-2-5p mature miRNA
• Sequence: 20 - CGGGGCCGUAACACUGUCUGAGA - 42
• Evidence: experimental ; Illumina [1]

Mature aca-miR-128-3p

• Accession: MIMAT0021733
• Description: Anolis carolinensis aca-miR-128-3p mature miRNA
• Sequence: 55 - UCACAGUGAACCGGUCUCUUUU - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107