Stem-loop aca-mir-133a-1

Accession

MI0018739

Description

Anolis carolinensis aca-mir-133a-1 precursor miRNA

Literature search

2 open access papers mention aca-mir-133a-1
(8 sentences)

Sequence

gaggcccagaaugcuuugcuaaagcugguaaaauggaaccaaaucaacuguucaauggaUUUGGUCCCCUUCAACCAGCUGuagcugugcauugauc
.........(((((...((((.(((((((..((.((.((((((((............)))))))).)).))..))))))).))))...)))))....

Structure

gaggcccag     uuu    a       aa  u  a        aacug 
         aaugc   gcua agcuggu  aa gg accaaauc     u
         |||||   |||| |||||||  || || ||||||||      
         uuacg   cgau UCGACCA  UU CC UGGUUUag     u
-----cuag     ugu    G       AC  C  C        guaac 

Annotation confidence Low

Genome context

chr4: 151864278-151864374 [+]

Mature aca-miR-133a

• Accession: MIMAT0021749
• Description: Anolis carolinensis aca-miR-133a mature miRNA
• Sequence: 60 - UUUGGUCCCCUUCAACCAGCUG - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107