miRBase entry: aca-mir-135-3

Stem-loop aca-mir-135-3


Accession
MI0018743
Description
Anolis carolinensis aca-mir-135-3 precursor miRNA


Sequence

534 reads, 187.0 reads per million, 2 experiments
aagcccucugcuguggucUAUGGCUUUUUAUUCCUAUGUGAUugcuuuucauaacucAUGUAGGGCUAAAAGCCAUGGGcuacacagaggaauaa
....((((((.(((((((((((((((((...((((((((((..............))))))))))..))))))))))))))))))))))).....

Structure
-aagc      c                 UAU          Uugcuu 
     ccucug uguggucUAUGGCUUUU   UCCUAUGUGA      u
     |||||| |||||||||||||||||   ||||||||||       
     ggagac acaucGGGUACCGAAAA   GGGAUGUAcu      u
aauaa      -                 -UC          caauac 


Annotation confidence High
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Genome context
GL343228.1: 62414-62508 [-]

Database links

Mature aca-miR-135-5p

Accession MIMAT0021750
Description Anolis carolinensis aca-miR-135-5p mature miRNA
Sequence 19 - UAUGGCUUUUUAUUCCUAUGUGAU - 42
Evidence experimental
Illumina [1]

Mature aca-miR-135-3-3p

Accession MIMAT0021753
Description Anolis carolinensis aca-miR-135-3-3p mature miRNA
Sequence 58 - AUGUAGGGCUAAAAGCCAUGGG - 79
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21775315
    MicroRNAs support a turtle + lizard clade
    "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
    "Biol Lett (2012) 8:104-107