Stem-loop aca-mir-146b

Accession

MI0018757

Description

Anolis carolinensis aca-mir-146b precursor miRNA

Sequence

guuccaagcuuUGAGAACUGGUUUUCGUGGACUgguuuccauuuagucuucucagUCCAUAAUGCUCAGUUUUCCAgcuuggcugcacc
((.(((((((..((((((((((.((.(((((((((................))))))))))).)).)))))))).)))))))..))...

Structure

---  -u       uU        -  U  C         uuuccau 
   gu  ccaagcu  GAGAACUG GU UU GUGGACUgg       u
   ||  |||||||  |||||||| || || |||||||||        
   cg  gguucgA  CUUUUGAC CG AA UACCUgacu       u
cca  uc       -C        U  U  -         cuucuga 

Annotation confidence Not enough data

Genome context

GL343301.1: 1588671-1588759 [+]

Mature aca-miR-146b-5p

• Accession: MIMAT0021777
• Description: Anolis carolinensis aca-miR-146b-5p mature miRNA
• Sequence: 12 - UGAGAACUGGUUUUCGUGGACU - 33
• Evidence: experimental ; Illumina [1]

Mature aca-miR-146b-3p

• Accession: MIMAT0021778
• Description: Anolis carolinensis aca-miR-146b-3p mature miRNA
• Sequence: 56 - UCCAUAAUGCUCAGUUUUCCA - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107