Stem-loop aca-mir-1662

Accession

MI0018767

Description

Anolis carolinensis aca-mir-1662 precursor miRNA

Sequence

acugugggcUUGACAUCAUCCUACUUGAGAUguaauguaaugcaaaguCCCAAGUAGGUUGAUGUCUGGcccaagaugg
....((((((.(((((((.((((((((.(((....(((...)))..))).)))))))).))))))).))))))......

Structure

--acug      U       U        A   guaa   a 
      ugggcU GACAUCA CCUACUUG GAU    ugu  
      |||||| ||||||| |||||||| |||    ||| a
      acccGG CUGUAGU GGAUGAAC Cug    acg  
gguaga      U       U        C   --aa   u 

Annotation confidence Not enough data

Genome context

chr6: 2558244-2558322 [+]

Mature aca-miR-1662-5p

• Accession: MIMAT0021794
• Description: Anolis carolinensis aca-miR-1662-5p mature miRNA
• Sequence: 10 - UUGACAUCAUCCUACUUGAGAU - 31
• Evidence: experimental ; Illumina [1]

Mature aca-miR-1662-3p

• Accession: MIMAT0021795
• Description: Anolis carolinensis aca-miR-1662-3p mature miRNA
• Sequence: 49 - CCCAAGUAGGUUGAUGUCUGG - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107