miRBase entry: aca-mir-181b-2

Stem-loop aca-mir-181b-2


Accession
MI0018779
Description
Anolis carolinensis aca-mir-181b-2 precursor miRNA


Sequence


caaaaggucacaaucAACAUUCAUUGCUGUCGGUGGGuuuaacuauguggacaagcucacugaacaaugaaugcaacuguggccccac
.....(((((((.....(((((((((...(((((((((((..((....))..))))))))))).)))))))))....)))))))....

Structure
caaaa       aucAA         CUG           aa  a 
     ggucaca     CAUUCAUUG   UCGGUGGGuuu  cu u
     |||||||     |||||||||   |||||||||||  ||  
     ccggugu     guaaguaac   agucacucgaa  gg g
-cacc       -caac         --a           ca  u 


Annotation confidence Low
Do you think this miRNA is real?

Genome context
GL343211.1: 716891-716978 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from aca-mir-181b-2
Name Accession Chromosome Start End Strand Confidence




Database links


References

  1. PubMed ID: 21775315
    MicroRNAs support a turtle + lizard clade
    "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
    "Biol Lett (2012) 8:104-107