Accession
MI0018783
Description
Anolis carolinensis
aca-mir-18a precursor miRNA
Sequence
366
reads,
129.0
reads per million, 2 experiments
agugacugcuuuuuguucUAAGGUGCAUCUAGUGCAGAUAGUGaaguagauuagcaucuACUGCCCUAAGUGCUCCUUCUGGcauaagaaguugug
....((.(((((((((.((((((.((((.(((.((((.(((((..(.....)..)).))))))).))).)))).)))..))).))))))))).)).
....((.(((((((((.((((((.((((.(((.((((.(((((..(.....)..)).))))))).))).)))).)))..))).))))))))).)).
Structure
agug u u -- U C U A - aa u
ac gcuuuuugu cUA AGG GCAU UAG GCAG UAG UG g a
|| ||||||||| ||| ||| |||| ||| |||| ||| || | g
ug ugaagaaua GGU UCC CGUG AUC CGUC Auc ac u a
---g u c CU U A C - u ga u
Annotation confidence
High
Do you think this miRNA is real?
Genome context
GL343584.1: 108387-108482 [+]
Clustered miRNAs
5 other miRNAs are < 10 kb from aca-mir-18a
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature aca-miR-18a-5p
| Accession | MIMAT0021817 |
| Description | Anolis carolinensis aca-miR-18a-5p mature miRNA |
| Sequence | 19 - UAAGGUGCAUCUAGUGCAGAUAGUG - 43 |
| Evidence |
experimental
Illumina [1] |
Mature aca-miR-18a-3p
| Accession | MIMAT0021818 |
| Description | Anolis carolinensis aca-miR-18a-3p mature miRNA |
| Sequence | 60 - ACUGCCCUAAGUGCUCCUUCUGG - 82 |
| Evidence |
experimental
Illumina [1] |
References
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