Stem-loop aca-mir-202

Accession

MI0018804

Description

Anolis carolinensis aca-mir-202 precursor miRNA

Sequence

cucauuguuccuuUUUCCUAUGCAUAUACUUCUUugagaaucugaucUAAAGAGGCAUACGGCAUGGGAAaauggggcaauugaggua
(((((((((((.(((((((((((.(((.(((((((.(((......)))))))))).)))..))))))))))).))))))).))))...

Structure

---    -       u           -A   A       g   au 
   cuca uuguucc uUUUCCUAUGC  UAU CUUCUUu aga  c
   |||| ||||||| |||||||||||  ||| ||||||| |||   
   gagu aacgggg aaAAGGGUACG  AUA GGAGAAA Ucu  u
aug    u       u           GC   C       -   ag 

Annotation confidence Not enough data

Genome context

GL343262.1: 426448-426535 [-]

Mature aca-miR-202-5p

• Accession: MIMAT0021848
• Description: Anolis carolinensis aca-miR-202-5p mature miRNA
• Sequence: 14 - UUUCCUAUGCAUAUACUUCUU - 34
• Evidence: experimental ; Illumina [1]

Mature aca-miR-202-5p.2

• Accession: MIMAT0021849
• Description: Anolis carolinensis aca-miR-202-5p.2 mature miRNA
• Sequence: 48 - UAAAGAGGCAUACGGCAUGGGA - 69
• Evidence: experimental ; Illumina [1]

Mature aca-miR-202-3p.1

• Accession: MIMAT0021850
• Description: Anolis carolinensis aca-miR-202-3p.1 mature miRNA
• Sequence: 51 - AGAGGCAUACGGCAUGGGAA - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107