Stem-loop aca-mir-203

Accession

MI0018805

Description

Anolis carolinensis aca-mir-203 precursor miRNA

Sequence

103962 reads, 35867.0 reads per million, 2 experiments

caaauccaagccugcugggugcAGUGGUUCUUAACAGUUCAACAguucucuauuauaauuGUGAAAUGUUUAGGACCACUUGauccggcgggcccagg
.........(((((((((((..(((((((((.((((.((((.(((((.........))))))))).)))).)))))))))..))))))))))).....

Structure

caaauccaa           gc         U    G    A     cuc 
         gccugcugggu  AGUGGUUCU AACA UUCA CAguu   u
         |||||||||||  ||||||||| |||| |||| |||||   a
         cgggcggccua  UCACCAGGA UUGU AAGU Guuaa   u
----ggacc           GU         U    A    -     uau 

Annotation confidence High

Genome context

chr1: 5622429-5622526 [-]

Mature aca-miR-203-5p

• Accession: MIMAT0021851
• Description: Anolis carolinensis aca-miR-203-5p mature miRNA
• Sequence: 23 - AGUGGUUCUUAACAGUUCAACA - 44
• Evidence: experimental ; Illumina [1]

Mature aca-miR-203-3p

• Accession: MIMAT0021852
• Description: Anolis carolinensis aca-miR-203-3p mature miRNA
• Sequence: 61 - GUGAAAUGUUUAGGACCACUUG - 82
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107