miRBase entry: aca-mir-205a

Stem-loop aca-mir-205a


Accession
MI0018808
Description
Anolis carolinensis aca-mir-205a precursor miRNA


Sequence

68715 reads, 23896.0 reads per million, 2 experiments
guucuauugUCCUUCAUUCCACCGGAGUCUGucucauaucuaaucaGAUUUCAGUGGAGUGAAGCACaagagaca
..(((.((((.(((((((((((.((((((((.............)))))))).))))))))))).)))).)))..

Structure
gu   a    C           C        ucuca 
  ucu uugU CUUCAUUCCAC GGAGUCUG     u
  ||| |||| ||||||||||| ||||||||     a
  aga aaCA GAAGUGAGGUG CUUUAGac     u
ac   g    C           A        uaauc 


Annotation confidence High
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Genome context
chr4: 125660740-125660814 [+]

Database links

Mature aca-miR-205a-5p

Accession MIMAT0021855
Description Anolis carolinensis aca-miR-205a-5p mature miRNA
Sequence 10 - UCCUUCAUUCCACCGGAGUCUG - 31
Evidence experimental
Illumina [1]

Mature aca-miR-205a-3p

Accession MIMAT0057917
Description Anolis carolinensis aca-miR-205a-3p mature miRNA
Sequence 47 - GAUUUCAGUGGAGUGAAGCAC - 67
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21775315
    MicroRNAs support a turtle + lizard clade
    "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
    "Biol Lett (2012) 8:104-107