Stem-loop aca-mir-21

Accession

MI0018814

Description

Anolis carolinensis aca-mir-21 precursor miRNA

Sequence

691967 reads, 237175.0 reads per million, 2 experiments

cggaUAGCUUAUCAGACUGAUGUUGACUGuuggaugucauggcAACAACAGUCGGUAGGCUGUCUga
(((((((((((((.(((((.(((((.((((........))))))))).)))))))))))))))))).

Structure

-             A     A     A    ugg 
 cggaUAGCUUAUC GACUG UGUUG CUGu   a
 ||||||||||||| ||||| ||||| ||||    
 gUCUGUCGGAUGG CUGAC ACAAc ggua   u
a             -     A     -    cug 

Annotation confidence Medium

Genome context

GL343470.1: 228465-228531 [-]

Mature aca-miR-21-5p

• Accession: MIMAT0021865
• Description: Anolis carolinensis aca-miR-21-5p mature miRNA
• Sequence: 5 - UAGCUUAUCAGACUGAUGUUGACUG - 29
• Evidence: experimental ; Illumina [1]

Mature aca-miR-21-3p

• Accession: MIMAT0021866
• Description: Anolis carolinensis aca-miR-21-3p mature miRNA
• Sequence: 44 - AACAACAGUCGGUAGGCUGUCU - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107