miRBase entry: aca-mir-212

Stem-loop aca-mir-212


Accession
MI0018816
Description
Anolis carolinensis aca-mir-212 precursor miRNA


Sequence

726 reads, 258.0 reads per million, 2 experiments
ccagcgugccgggACCUUGGCUCUAGACUGCUUACUgcgaaauccaaggggcgaaacagUAACAGUCCACAGUCAUGGCUacugacggcuggcgguggc
(((.(((((((((.((.(((((...(((((.((((((.....(((...))).....)))))))))))...))))).)))).....))))..))).))).

Structure
-   g   --    -----  A  U     CUA     C      cgaaa   a 
 cca cgu  gccg     gg CC UGGCU   GACUG UUACUg     ucc  
 ||| |||  ||||     || || |||||   ||||| ||||||     ||| a
 ggu gcg  cggc     UC GG ACUGA   CUGAC AAUgac     ggg  
c   g   gu    aguca  -  U     CAC     -      aaagc   g 


Annotation confidence High
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature aca-miR-212-5p

Accession MIMAT0021869
Description Anolis carolinensis aca-miR-212-5p mature miRNA
Sequence 14 - ACCUUGGCUCUAGACUGCUUACU - 36
Evidence experimental
Illumina [1]

Mature aca-miR-212-3p

Accession MIMAT0021870
Description Anolis carolinensis aca-miR-212-3p mature miRNA
Sequence 60 - UAACAGUCCACAGUCAUGGCU - 80
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21775315
    MicroRNAs support a turtle + lizard clade
    "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
    "Biol Lett (2012) 8:104-107