Stem-loop aca-mir-31

Accession

MI0018852

Description

Anolis carolinensis aca-mir-31 precursor miRNA

Sequence

auucagagcuggagcggAGGCAAGAUGUUGGCAUAGCUgaugaguuaagaaccugcUAUGCCAACAUAUUGCCCUCuuuccug
..........((((.((((((((.(((((((((((((.................))))))))))))).))).)))))))))..

Structure

auucagagcu    c     -   G             Ugaugag 
          ggag ggAGG CAA AUGUUGGCAUAGC       u
          |||| ||||| ||| |||||||||||||       u
          ccuu uCUCC GUU UACAACCGUAUcg       a
--------gu    -     C   A             uccaaga 

Annotation confidence Low

Genome context

chr2: 61607424-61607506 [+]

Mature aca-miR-31-5p

• Accession: MIMAT0021930
• Description: Anolis carolinensis aca-miR-31-5p mature miRNA
• Sequence: 18 - AGGCAAGAUGUUGGCAUAGCU - 38
• Evidence: experimental ; Illumina [1]

Mature aca-miR-31-3p

• Accession: MIMAT0021931
• Description: Anolis carolinensis aca-miR-31-3p mature miRNA
• Sequence: 57 - UAUGCCAACAUAUUGCCCUC - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107